STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGC69294.1Hypothetical protein. (629 aa)    
Predicted Functional Partners:
AGC67662.1
Hypothetical protein.
  
     0.592
AGC67515.1
Glucoside hyrolase family10.
  
   
 0.521
AGC69605.1
Two component transcriptional regulator, AraC family.
  
     0.492
AGC69607.1
Extracellular solute-binding protein, family 1.
  
     0.478
AGC67185.1
S-layer domain-containing protein.
  
     0.469
AGC68183.1
Hypothetical protein.
  
     0.450
AGC69454.1
PpiC-type peptidyl-prolyl cis-trans isomerase.
  
     0.428
AGC69293.1
Hypothetical protein.
       0.427
AGC69230.1
GCN5-like N-acetyltransferase.
  
     0.425
AGC69370.1
Anti-sigma regulatory factor; Ser/Thr protein kinase.
  
     0.410
Your Current Organism:
Thermoclostridium stercorarium
NCBI taxonomy Id: 1121335
Other names: Clostridium stercorarium subsp. stercorarium DSM 8532, T. stercorarium subsp. stercorarium DSM 8532, Thermoclostridium stercorarium subsp. stercorarium DSM 8532
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