STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGC69402.1Polysaccharide biosynthesis protein. (496 aa)    
Predicted Functional Partners:
csaB
Polysaccharide pyruvyl transferase CsaB.
  
  
 0.885
wecB
UDP-N-acetylglucosamine 2-epimerase WecB; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
  
  
 0.656
AGC69407.1
TPR/glycosyl transferase domain-containing protein.
 
  
 0.629
epsL
Putative sugar transferase EpsL.
 
  
 0.612
AGC69401.1
Coenzyme F390 synthetase-like protein.
 
     0.603
epsF
Putative glycosyltransferase EpsF.
 
  
 0.488
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
 
     0.470
capL
Protein CapL; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
  
  
 0.467
AGC69404.1
O-antigen polymerase.
  
  
 0.463
gatC
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family.
   
    0.448
Your Current Organism:
Thermoclostridium stercorarium
NCBI taxonomy Id: 1121335
Other names: Clostridium stercorarium subsp. stercorarium DSM 8532, T. stercorarium subsp. stercorarium DSM 8532, Thermoclostridium stercorarium subsp. stercorarium DSM 8532
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.