STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
uglUnsaturated glucuronyl hydrolase Ugl. (379 aa)    
Predicted Functional Partners:
AGC69059.1
Hypothetical protein.
     0.812
kduI
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase KduI; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family.
 
   
 0.750
kdgA
KHG/KDPG aldolase KdgA.
  
 0.675
AGC68044.1
Putative unsaturated rhamnogalacturonyl hydrolase.
  
     0.590
AGC67967.1
Hypothetical protein.
  
     0.446
AGC69451.1
S-layer domain-containing protein.
       0.425
kduD
2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD.
 
   
 0.415
Your Current Organism:
Thermoclostridium stercorarium
NCBI taxonomy Id: 1121335
Other names: Clostridium stercorarium subsp. stercorarium DSM 8532, T. stercorarium subsp. stercorarium DSM 8532, Thermoclostridium stercorarium subsp. stercorarium DSM 8532
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