STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fbpCFe(3+) ions import ATP-binding protein FbpC; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. (373 aa)    
Predicted Functional Partners:
fbpB
Ferric transport system permease protein FbpB.
 
 0.993
AGC69695.1
Fe3+ ABC superfamily ATP binding cassette transporter, binding protein.
 
 
 0.977
potB
Spermidine/putrescine transport system permease protein PotB.
 
 0.973
potC
Spermidine/putrescine transport system permease protein PotC.
  
 0.953
potD
Spermidine/putrescine transport system substarte-binding protein PotD.
  
 0.937
macB1
Macrolide export ATP-binding/permease protein MacB.
 
    0.883
AGC69692.1
Hypothetical protein.
       0.700
AGC69691.1
Hypothetical protein.
       0.680
macB2
Macrolide export ATP-binding/permease protein MacB.
 
 
    0.679
AGC69690.1
Hypothetical protein.
       0.593
Your Current Organism:
Thermoclostridium stercorarium
NCBI taxonomy Id: 1121335
Other names: Clostridium stercorarium subsp. stercorarium DSM 8532, T. stercorarium subsp. stercorarium DSM 8532, Thermoclostridium stercorarium subsp. stercorarium DSM 8532
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