STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KYH35218.1Hypothetical protein. (465 aa)    
Predicted Functional Partners:
mutE
Methylaspartate mutase E chain; Catalyzes the carbon skeleton rearrangement of L-glutamate to L-threo-3-methylaspartate ((2S,3S)-3-methylaspartate).
 
     0.961
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
  
 
 0.954
mamA
Methylaspartate mutase S chain; Catalyzes the carbon skeleton rearrangement of L-glutamate to L-threo-3-methylaspartate ((2S,3S)-3-methylaspartate).
 
     0.943
KYH35220.1
Methylaspartate ammonia-lyase.
 
     0.921
KYH34474.1
Cell division protein FtsN.
   
 
 0.872
divIB
Cell division protein DivIB; Essential cell division protein.
  
 
 0.821
ytrA_2
HTH-type transcriptional repressor YtrA.
 
     0.736
oraE
D-ornithine 4,5-aminomutase subunit beta.
 
     0.637
oraS
D-ornithine 4,5-aminomutase subunit alpha.
 
     0.625
sepF
Cell division protein SepF; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA.
  
 
 0.616
Your Current Organism:
Clostridium tepidiprofundi
NCBI taxonomy Id: 1121338
Other names: C. tepidiprofundi DSM 19306, Clostridium tepidiprofundi DSM 19306, Clostridium tepidiprofundi SG 508
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.