STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000620945_02162Unannotated protein. (747 aa)    
Predicted Functional Partners:
GCA_000620945_02160
Unannotated protein.
 0.999
GCA_000620945_01725
Unannotated protein.
 0.998
GCA_000620945_02078
Unannotated protein.
  
  
 0.750
GCA_000620945_00438
Unannotated protein.
  
 
 
 0.674
GCA_000620945_02161
Unannotated protein.
 
   
 0.634
GCA_000620945_01063
Unannotated protein.
  
 
 
 0.609
GCA_000620945_02163
Unannotated protein.
       0.590
GCA_000620945_02223
Unannotated protein.
  
  
 0.581
GCA_000620945_01324
Unannotated protein.
 
  
 0.573
GCA_000620945_02164
Unannotated protein.
       0.570
Your Current Organism:
Clostridium viride
NCBI taxonomy Id: 1121344
Other names: Clostridium viride DSM 6836, [. viride DSM 6836, [Clostridium] viride DSM 6836
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.