STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGG66743.1Hypothetical protein; COG0457 FOG: TPR repeat. (448 aa)    
Predicted Functional Partners:
AGG66744.1
COG0647 Predicted sugar phosphatases of the HAD superfamily.
  
 
 0.962
ppnK
Inorganic polyphosphate/ATP-NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.
 
   
 0.878
rpoZ
DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
 
  0.783
AGG66748.1
Hypothetical protein; May be involved in recombinational repair of damaged DNA.
     
 0.768
alaS
alanyl-tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
   
 0.760
AGG66746.1
Hypothetical protein; COG1189 Predicted rRNA methylase.
  
  
 0.754
AGG66745.1
Hypothetical protein.
       0.752
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.677
AGG67176.1
COG0347 Nitrogen regulatory protein PII; Belongs to the P(II) protein family.
    
 
 0.658
AGG66496.1
Hypothetical protein.
  
     0.637
Your Current Organism:
Corynebacterium callunae
NCBI taxonomy Id: 1121353
Other names: C. callunae DSM 20147, Corynebacterium callunae DSM 20147
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.