STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000379705_01649Unannotated protein. (129 aa)    
Predicted Functional Partners:
GCA_000379705_01648
Unannotated protein.
       0.835
GCA_000379705_00195
Unannotated protein.
  
    0.761
GCA_000379705_00412
Unannotated protein.
  
     0.760
GCA_000379705_00494
Unannotated protein.
  
  0.759
GCA_000379705_00397
Unannotated protein.
  
     0.665
GCA_000379705_00705
Unannotated protein.
  
     0.615
GCA_000379705_01621
Unannotated protein.
  
     0.590
GCA_000379705_00779
Unannotated protein.
  
     0.581
GCA_000379705_01201
Unannotated protein.
  
     0.497
GCA_000379705_01423
Unannotated protein.
  
     0.489
Your Current Organism:
Corynebacterium caspium
NCBI taxonomy Id: 1121355
Other names: C. caspium DSM 44850, Corynebacterium caspium DSM 44850
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.