STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A605_01270Arabinosyltransferase. (1131 aa)    
Predicted Functional Partners:
acpP
COG0236 Acyl carrier protein.
  
 
 0.997
A605_01275
Arabinofuranosyl transferase A.
 
  
 0.987
A605_13120
Hypothetical protein.
  
  
 0.945
A605_07600
Hypothetical protein.
  
   
 0.831
A605_08175
Hypothetical protein.
  
   
 0.823
A605_13100
Hypothetical protein.
 
 
 0.823
A605_01310
COG2246 Predicted membrane protein.
 
     0.816
A605_01280
Short chain dehydrogenase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
 
   
 0.811
A605_01285
COG0277 FAD/FMN-containing dehydrogenases.
 
  
 0.787
A605_04140
Hypothetical protein.
 
   
 0.757
Your Current Organism:
Corynebacterium halotolerans
NCBI taxonomy Id: 1121362
Other names: C. halotolerans YIM 70093 = DSM 44683, Corynebacterium halotolerans DSM 44683, Corynebacterium halotolerans DSM 44683 = YIM 70093, Corynebacterium halotolerans YIM 70093, Corynebacterium halotolerans YIM 70093 = DSM 44683
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.