STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A605_10875Hypothetical protein; COG1466 DNA polymerase III, delta subunit. (320 aa)    
Predicted Functional Partners:
A605_01800
DNA polymerase III subunit delta; COG0470 ATPase involved in DNA replication.
  
 
 0.994
A605_00010
DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]
 
 
 0.993
A605_01475
COG2812 DNA polymerase III, gamma/tau subunits.
 
 
 0.993
dnaE
COG0587 DNA polymerase III, alpha subunit.
  
 0.992
A605_09250
COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases.
    
 0.943
A605_06325
COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases.
  
 
 0.933
A605_03600
Hypothetical protein; COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases.
    
 0.929
A605_01535
COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases.
    
 0.924
A605_06555
COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases.
    
 0.924
A605_10880
Hypothetical protein; COG0658 Predicted membrane metal-binding protein.
   
 0.860
Your Current Organism:
Corynebacterium halotolerans
NCBI taxonomy Id: 1121362
Other names: C. halotolerans YIM 70093 = DSM 44683, Corynebacterium halotolerans DSM 44683, Corynebacterium halotolerans DSM 44683 = YIM 70093, Corynebacterium halotolerans YIM 70093, Corynebacterium halotolerans YIM 70093 = DSM 44683
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