STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A605_12050Transcriptional regulator, LacI family protein; COG1609 Transcriptional regulators. (376 aa)    
Predicted Functional Partners:
A605_01255
Hypothetical protein; COG0067 Glutamate synthase domain 1.
    
 
 0.783
A605_12055
Hypothetical protein; COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin.
 
     0.728
A605_08385
Phosphocarrier protein HPr; COG1925 Phosphotransferase system, HPr-related proteins.
   
 
 0.688
A605_12060
ABC transport system, ATP-binding protein; COG1121 ABC-type Mn/Zn transport systems, ATPase component.
       0.681
A605_12065
Hypothetical protein; COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components.
       0.681
A605_06745
PTS system mannose-specific transporter subunit IIBCA; COG1264 Phosphotransferase system IIB components.
  
  
 0.608
A605_12070
Hypothetical protein; COG3509 Poly(3-hydroxybutyrate) depolymerase.
       0.600
A605_08380
Hypothetical protein; COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type).
     
 0.581
ribBA
Bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
   0.538
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
   0.448
Your Current Organism:
Corynebacterium halotolerans
NCBI taxonomy Id: 1121362
Other names: C. halotolerans YIM 70093 = DSM 44683, Corynebacterium halotolerans DSM 44683, Corynebacterium halotolerans DSM 44683 = YIM 70093, Corynebacterium halotolerans YIM 70093, Corynebacterium halotolerans YIM 70093 = DSM 44683
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.