STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A605_12850Hypothetical protein. (155 aa)    
Predicted Functional Partners:
A605_12845
SMC domain-containing protein; COG1106 Predicted ATPases.
 
     0.961
A605_12855
Aminotransferase AlaT; COG0436 Aspartate/tyrosine/aromatic aminotransferase.
       0.526
A605_00430
Transposase IS4 family protein.
  
     0.523
A605_02940
Transposase IS4 family protein.
  
     0.523
A605_12685
Transposase IS4 family protein.
  
     0.523
A605_12860
COG3044 Predicted ATPase of the ABC class.
       0.503
Your Current Organism:
Corynebacterium halotolerans
NCBI taxonomy Id: 1121362
Other names: C. halotolerans YIM 70093 = DSM 44683, Corynebacterium halotolerans DSM 44683, Corynebacterium halotolerans DSM 44683 = YIM 70093, Corynebacterium halotolerans YIM 70093, Corynebacterium halotolerans YIM 70093 = DSM 44683
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.