STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000419445_01850Unannotated protein. (313 aa)    
Predicted Functional Partners:
GCA_000419445_02342
Unannotated protein.
    
  0.677
GCA_000419445_01107
Unannotated protein.
  
     0.666
GCA_000419445_00914
Unannotated protein.
  
     0.510
GCA_000419445_01886
Unannotated protein.
  
     0.494
GCA_000419445_01849
Unannotated protein.
       0.468
GCA_000419445_02437
Unannotated protein.
  
     0.467
GCA_000419445_00040
Unannotated protein.
  
     0.464
GCA_000419445_01574
Unannotated protein.
  
     0.456
GCA_000419445_02682
Unannotated protein.
  
     0.448
GCA_000419445_00560
Unannotated protein.
  
     0.433
Your Current Organism:
Gryllotalpicola ginsengisoli
NCBI taxonomy Id: 1121372
Other names: Curtobacterium ginsengisoli DSM 22003, Curtobacterium sp. DCY26, G. ginsengisoli DSM 22003, Gryllotalpicola ginsengisoli DCY26, Gryllotalpicola ginsengisoli DSM 22003
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.