STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000419445_02140Unannotated protein. (330 aa)    
Predicted Functional Partners:
GCA_000419445_00604
Unannotated protein.
  
  
 0.725
GCA_000419445_01559
Unannotated protein.
  
   
 0.647
GCA_000419445_01556
Unannotated protein.
 
     0.628
GCA_000419445_01547
Unannotated protein.
 
 
 
  0.575
GCA_000419445_01471
Unannotated protein.
 
      0.566
GCA_000419445_01348
Unannotated protein.
  
  
  0.533
GCA_000419445_02399
Unannotated protein.
  
  0.532
GCA_000419445_01548
Unannotated protein.
   
 
  0.489
GCA_000419445_00607
Unannotated protein.
  
 
  0.448
GCA_000419445_00609
Unannotated protein.
 
 
 
  0.413
Your Current Organism:
Gryllotalpicola ginsengisoli
NCBI taxonomy Id: 1121372
Other names: Curtobacterium ginsengisoli DSM 22003, Curtobacterium sp. DCY26, G. ginsengisoli DSM 22003, Gryllotalpicola ginsengisoli DCY26, Gryllotalpicola ginsengisoli DSM 22003
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.