STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000419445_02728Unannotated protein. (323 aa)    
Predicted Functional Partners:
GCA_000419445_01464
Unannotated protein.
  
 
  0.680
GCA_000419445_01349
Unannotated protein.
  
   0.662
GCA_000419445_02727
Unannotated protein.
 
    
0.653
GCA_000419445_01301
Unannotated protein.
  
   0.562
GCA_000419445_00330
Unannotated protein.
   
 
 0.543
GCA_000419445_02780
Unannotated protein.
  
     0.500
GCA_000419445_00664
Unannotated protein.
 
    0.491
Your Current Organism:
Gryllotalpicola ginsengisoli
NCBI taxonomy Id: 1121372
Other names: Curtobacterium ginsengisoli DSM 22003, Curtobacterium sp. DCY26, G. ginsengisoli DSM 22003, Gryllotalpicola ginsengisoli DCY26, Gryllotalpicola ginsengisoli DSM 22003
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.