STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000620145_00723Unannotated protein. (444 aa)    
Predicted Functional Partners:
GCA_000620145_00724
Unannotated protein.
 
    0.854
GCA_000620145_00706
Unannotated protein.
  
   
 0.753
GCA_000620145_02684
Unannotated protein.
  
  
 0.695
GCA_000620145_02865
Unannotated protein.
  
   
 0.642
GCA_000620145_02188
Unannotated protein.
 
   
 0.617
GCA_000620145_02777
Unannotated protein.
  
   
 0.576
GCA_000620145_01682
Unannotated protein.
 
 
 0.575
GCA_000620145_03121
Unannotated protein.
 
    0.572
GCA_000620145_00725
Unannotated protein.
       0.570
GCA_000620145_03252
Unannotated protein.
 
 
 0.544
Your Current Organism:
Deefgea rivuli
NCBI taxonomy Id: 1121375
Other names: D. rivuli DSM 18356, Deefgea rivuli DSM 18356
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.