STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000620145_01460Unannotated protein. (236 aa)    
Predicted Functional Partners:
GCA_000620145_00087
Unannotated protein.
    
 0.776
GCA_000620145_00727
Unannotated protein.
    
  0.738
GCA_000620145_00728
Unannotated protein.
    
  0.738
GCA_000620145_03374
Unannotated protein.
    
  0.728
GCA_000620145_01077
Unannotated protein.
    
  0.694
GCA_000620145_03094
Unannotated protein.
    
  0.653
GCA_000620145_03095
Unannotated protein.
    
  0.653
GCA_000620145_03105
Unannotated protein.
    
 0.527
GCA_000620145_01431
Unannotated protein.
     
 0.502
GCA_000620145_01240
Unannotated protein.
    
   0.497
Your Current Organism:
Deefgea rivuli
NCBI taxonomy Id: 1121375
Other names: D. rivuli DSM 18356, Deefgea rivuli DSM 18356
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.