STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000620145_01904Unannotated protein. (411 aa)    
Predicted Functional Partners:
GCA_000620145_01905
Unannotated protein.
 
 0.999
GCA_000620145_01906
Unannotated protein.
 0.999
GCA_000620145_00620
Unannotated protein.
     
 0.908
GCA_000620145_02123
Unannotated protein.
     
 0.899
GCA_000620145_02548
Unannotated protein.
     
 0.897
GCA_000620145_01762
Unannotated protein.
   
    0.740
GCA_000620145_02566
Unannotated protein.
 
  
 
0.590
GCA_000620145_01945
Unannotated protein.
     
 0.534
GCA_000620145_01833
Unannotated protein.
   
  
 0.490
GCA_000620145_01903
Unannotated protein.
       0.482
Your Current Organism:
Deefgea rivuli
NCBI taxonomy Id: 1121375
Other names: D. rivuli DSM 18356, Deefgea rivuli DSM 18356
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.