STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000381345_00907Unannotated protein. (223 aa)    
Predicted Functional Partners:
GCA_000381345_04259
Unannotated protein.
 
 0.915
GCA_000381345_03622
Unannotated protein.
 
 0.907
GCA_000381345_01372
Unannotated protein.
   
 0.865
GCA_000381345_01655
Unannotated protein.
 
 0.859
GCA_000381345_02272
Unannotated protein.
 
 0.855
GCA_000381345_04134
Unannotated protein.
   
  0.845
GCA_000381345_02976
Unannotated protein.
   
  0.815
GCA_000381345_04125
Unannotated protein.
   
  0.814
GCA_000381345_03731
Unannotated protein.
   
 
 0.796
GCA_000381345_04261
Unannotated protein.
 
 0.795
Your Current Organism:
Deinococcus apachensis
NCBI taxonomy Id: 1121377
Other names: D. apachensis DSM 19763, Deinococcus apachensis DSM 19763
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.