STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000378445_03503Unannotated protein. (319 aa)    
Predicted Functional Partners:
GCA_000378445_03504
Unannotated protein.
 0.998
GCA_000378445_03506
Unannotated protein.
 
    0.815
GCA_000378445_00544
Unannotated protein.
  
 0.809
GCA_000378445_03505
Unannotated protein.
       0.773
GCA_000378445_04265
Unannotated protein.
   
  0.748
GCA_000378445_04274
Unannotated protein.
   
  0.741
GCA_000378445_03409
Unannotated protein.
   
  0.739
GCA_000378445_04269
Unannotated protein.
   
  0.736
GCA_000378445_04279
Unannotated protein.
   
  0.734
GCA_000378445_00529
Unannotated protein.
   
  0.731
Your Current Organism:
Deinococcus aquatilis
NCBI taxonomy Id: 1121378
Other names: D. aquatilis DSM 23025, Deinococcus aquatilis DSM 23025
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.