STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000378445_03836Unannotated protein. (289 aa)    
Predicted Functional Partners:
GCA_000378445_00851
Unannotated protein.
  
  
  0.906
GCA_000378445_03835
Unannotated protein.
    
  0.810
GCA_000378445_01563
Unannotated protein.
 
 
 0.782
GCA_000378445_03837
Unannotated protein.
 
    0.777
GCA_000378445_00436
Unannotated protein.
    
 0.762
GCA_000378445_00951
Unannotated protein.
    
  0.706
GCA_000378445_02371
Unannotated protein.
  
     0.705
GCA_000378445_02607
Unannotated protein.
   
 0.698
GCA_000378445_02684
Unannotated protein.
    
 0.654
GCA_000378445_02682
Unannotated protein.
    
 0.652
Your Current Organism:
Deinococcus aquatilis
NCBI taxonomy Id: 1121378
Other names: D. aquatilis DSM 23025, Deinococcus aquatilis DSM 23025
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.