STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000378445_04196Unannotated protein. (163 aa)    
Predicted Functional Partners:
GCA_000378445_01389
Unannotated protein.
  
     0.626
GCA_000378445_02685
Unannotated protein.
  
     0.502
GCA_000378445_02960
Unannotated protein.
  
 
 0.490
GCA_000378445_04206
Unannotated protein.
  
     0.439
GCA_000378445_01888
Unannotated protein.
    
   0.438
GCA_000378445_02624
Unannotated protein.
    
   0.438
GCA_000378445_00962
Unannotated protein.
  
     0.409
GCA_000378445_01145
Unannotated protein.
  
     0.409
Your Current Organism:
Deinococcus aquatilis
NCBI taxonomy Id: 1121378
Other names: D. aquatilis DSM 23025, Deinococcus aquatilis DSM 23025
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.