STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000376825_00416Unannotated protein. (421 aa)    
Predicted Functional Partners:
GCA_000376825_02638
Unannotated protein.
     
 0.622
GCA_000376825_00417
Unannotated protein.
       0.518
GCA_000376825_00418
Unannotated protein.
       0.518
GCA_000376825_00411
Unannotated protein.
   
  0.477
GCA_000376825_01602
Unannotated protein.
   
  0.477
GCA_000376825_01904
Unannotated protein.
   
  0.477
GCA_000376825_03194
Unannotated protein.
   
  0.477
GCA_000376825_02326
Unannotated protein.
    
  0.473
GCA_000376825_00419
Unannotated protein.
       0.470
GCA_000376825_00169
Unannotated protein.
    
  0.445
Your Current Organism:
Demetria terragena
NCBI taxonomy Id: 1121385
Other names: D. terragena DSM 11295, Demetria terragena DSM 11295
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.