STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000376825_02271Unannotated protein. (401 aa)    
Predicted Functional Partners:
GCA_000376825_03071
Unannotated protein.
 
 
    0.826
GCA_000376825_02272
Unannotated protein.
 
     0.717
GCA_000376825_01355
Unannotated protein.
  
  
 
0.699
GCA_000376825_00339
Unannotated protein.
  
 
  0.683
GCA_000376825_02552
Unannotated protein.
 
 
  0.672
GCA_000376825_00395
Unannotated protein.
   
 
  0.574
GCA_000376825_02274
Unannotated protein.
       0.457
GCA_000376825_02273
Unannotated protein.
       0.443
Your Current Organism:
Demetria terragena
NCBI taxonomy Id: 1121385
Other names: D. terragena DSM 11295, Demetria terragena DSM 11295
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.