STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMC17041.1Acyl-CoA dehydrogenase. (414 aa)    
Predicted Functional Partners:
SMC24643.1
3-hydroxyacyl-CoA dehydrogenase.
  
 0.976
SMC17046.1
feruloyl-CoA synthase.
 
 
 0.886
SMC19590.1
Electron transfer flavoprotein alpha subunit apoprotein.
 
 0.832
SMC19618.1
Electron transfer flavoprotein alpha subunit apoprotein.
 
 0.799
SMC17050.1
DNA-binding transcriptional regulator, MerR family.
 
    0.764
SMC18306.1
Electron transfer flavoprotein alpha subunit apoprotein.
 
 0.763
SMC18295.1
Electron transfer flavoprotein beta subunit.
  
 
 0.751
SMC19592.1
Electron transfer flavoprotein beta subunit.
 
 
 0.751
SMC19616.1
Electron transfer flavoprotein beta subunit.
 
 
 0.751
SMC20790.1
Rubredoxin.
  
 
 0.735
Your Current Organism:
Desulfacinum hydrothermale
NCBI taxonomy Id: 1121390
Other names: D. hydrothermale DSM 13146, Desulfacinum hydrothermale DSM 13146
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.