STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMC18685.1Ketoisovalerate ferredoxin oxidoreductase, beta subunit. (300 aa)    
Predicted Functional Partners:
SMC18682.1
Pyruvate ferredoxin oxidoreductase alpha subunit.
 0.998
SMC24453.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
  
 0.998
SMC19561.1
Pyruvate ferredoxin oxidoreductase alpha subunit.
 0.995
SMC23332.1
Pyruvate ferredoxin oxidoreductase alpha subunit.
 0.995
SMC18671.1
Pyruvate ferredoxin oxidoreductase gamma subunit.
 
 0.975
SMC23335.1
Pyruvate ferredoxin oxidoreductase gamma subunit.
 
 0.972
SMC17957.1
Pyruvate ferredoxin oxidoreductase, gamma subunit.
 
 0.971
SMC17765.1
Pyruvate:ferredoxin oxidoreductase.
 
 0.957
SMC23333.1
Pyruvate ferredoxin oxidoreductase delta subunit.
 
 0.950
SMC17960.1
Pyruvate ferredoxin oxidoreductase delta subunit.
 
 0.949
Your Current Organism:
Desulfacinum hydrothermale
NCBI taxonomy Id: 1121390
Other names: D. hydrothermale DSM 13146, Desulfacinum hydrothermale DSM 13146
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.