STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMC20843.1Polar amino acid transport system ATP-binding protein. (245 aa)    
Predicted Functional Partners:
SMC22002.1
Glutamine transport system permease protein.
 0.992
SMC21057.1
Amino acid ABC transporter membrane protein 2, PAAT family.
 0.965
SMC25003.1
Polar amino acid transport system permease protein.
 0.959
SMC21050.1
Amino acid ABC transporter membrane protein 1, PAAT family.
 0.957
SMC21955.1
General L-amino acid transport system permease protein.
 0.957
SMC27123.1
Amino acid ABC transporter membrane protein, PAAT family.
 0.957
SMC27043.1
Polar amino acid transport system permease protein.
 0.949
SMC25005.1
Amino acid ABC transporter membrane protein 2, PAAT family (TC 3.A.1.3.-).
 0.945
SMC21978.1
Putative ABC transport system permease protein.
 
      0.900
SMC21980.1
Putative ABC transport system permease protein.
 
      0.898
Your Current Organism:
Desulfacinum hydrothermale
NCBI taxonomy Id: 1121390
Other names: D. hydrothermale DSM 13146, Desulfacinum hydrothermale DSM 13146
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.