Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SMC17325.1 | SMC22804.1 | SAMN02746041_00284 | SAMN02746041_01554 | Coenzyme F420-reducing hydrogenase, delta subunit. | Rhodanese-related sulfurtransferase. | 0.813 |
SMC21010.1 | SMC21194.1 | SAMN02746041_01088 | SAMN02746041_01149 | Molybdopterin or thiamine biosynthesis adenylyltransferase. | Cysteine desulfurase. | 0.933 |
SMC21010.1 | SMC22804.1 | SAMN02746041_01088 | SAMN02746041_01554 | Molybdopterin or thiamine biosynthesis adenylyltransferase. | Rhodanese-related sulfurtransferase. | 0.753 |
SMC21010.1 | SMC25924.1 | SAMN02746041_01088 | SAMN02746041_02463 | Molybdopterin or thiamine biosynthesis adenylyltransferase. | Glyoxylase, beta-lactamase superfamily II. | 0.776 |
SMC21194.1 | SMC21010.1 | SAMN02746041_01149 | SAMN02746041_01088 | Cysteine desulfurase. | Molybdopterin or thiamine biosynthesis adenylyltransferase. | 0.933 |
SMC21194.1 | SMC22804.1 | SAMN02746041_01149 | SAMN02746041_01554 | Cysteine desulfurase. | Rhodanese-related sulfurtransferase. | 0.896 |
SMC21194.1 | SMC22811.1 | SAMN02746041_01149 | SAMN02746041_01559 | Cysteine desulfurase. | Molybdopterin or thiamine biosynthesis adenylyltransferase. | 0.933 |
SMC21194.1 | SMC25924.1 | SAMN02746041_01149 | SAMN02746041_02463 | Cysteine desulfurase. | Glyoxylase, beta-lactamase superfamily II. | 0.903 |
SMC22794.1 | SMC22796.1 | SAMN02746041_01552 | SAMN02746041_01553 | Putative ABC transport system ATP-binding protein. | Cyclic nucleotide-binding domain-containing protein. | 0.936 |
SMC22794.1 | SMC22804.1 | SAMN02746041_01552 | SAMN02746041_01554 | Putative ABC transport system ATP-binding protein. | Rhodanese-related sulfurtransferase. | 0.835 |
SMC22794.1 | SMC25924.1 | SAMN02746041_01552 | SAMN02746041_02463 | Putative ABC transport system ATP-binding protein. | Glyoxylase, beta-lactamase superfamily II. | 0.424 |
SMC22794.1 | SMC27144.1 | SAMN02746041_01552 | SAMN02746041_02879 | Putative ABC transport system ATP-binding protein. | Superoxide dismutase. | 0.605 |
SMC22794.1 | rpsQ | SAMN02746041_01552 | SAMN02746041_02554 | Putative ABC transport system ATP-binding protein. | Small subunit ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.473 |
SMC22794.1 | ybeY | SAMN02746041_01552 | SAMN02746041_00415 | Putative ABC transport system ATP-binding protein. | Probable rRNA maturation factor; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.586 |
SMC22796.1 | SMC22794.1 | SAMN02746041_01553 | SAMN02746041_01552 | Cyclic nucleotide-binding domain-containing protein. | Putative ABC transport system ATP-binding protein. | 0.936 |
SMC22796.1 | SMC22804.1 | SAMN02746041_01553 | SAMN02746041_01554 | Cyclic nucleotide-binding domain-containing protein. | Rhodanese-related sulfurtransferase. | 0.759 |
SMC22804.1 | SMC17325.1 | SAMN02746041_01554 | SAMN02746041_00284 | Rhodanese-related sulfurtransferase. | Coenzyme F420-reducing hydrogenase, delta subunit. | 0.813 |
SMC22804.1 | SMC21010.1 | SAMN02746041_01554 | SAMN02746041_01088 | Rhodanese-related sulfurtransferase. | Molybdopterin or thiamine biosynthesis adenylyltransferase. | 0.753 |
SMC22804.1 | SMC21194.1 | SAMN02746041_01554 | SAMN02746041_01149 | Rhodanese-related sulfurtransferase. | Cysteine desulfurase. | 0.896 |
SMC22804.1 | SMC22794.1 | SAMN02746041_01554 | SAMN02746041_01552 | Rhodanese-related sulfurtransferase. | Putative ABC transport system ATP-binding protein. | 0.835 |
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