STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMC23359.1AAA domain-containing protein. (244 aa)    
Predicted Functional Partners:
fusA
Translation elongation factor 2 (EF-2/EF-G); Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. [...]
 
     0.867
SMC22750.1
Protein of unknown function.
  
     0.739
SMC23419.1
PAS domain S-box-containing protein.
   
 
 0.737
SMC23547.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
 
 
 0.720
SMC25338.1
Signal transduction histidine kinase, nitrogen specific.
   
 
 0.718
SMC22332.1
Signal transduction histidine kinase.
    
 
 0.685
SMC27576.1
His Kinase A (phospho-acceptor) domain-containing protein.
    
 
 0.685
SMC25192.1
Tetratricopeptide repeat-containing protein.
  
     0.677
SMC24562.1
Ogr/Delta-like zinc finger.
  
     0.609
SMC26550.1
Uncharacterized conserved protein YybS, DUF2232 family.
  
     0.566
Your Current Organism:
Desulfacinum hydrothermale
NCBI taxonomy Id: 1121390
Other names: D. hydrothermale DSM 13146, Desulfacinum hydrothermale DSM 13146
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.