STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMC26637.1Ribosomal-protein-alanine N-acetyltransferase. (167 aa)    
Predicted Functional Partners:
SMC25138.1
tRNA threonylcarbamoyladenosine biosynthesis protein TsaB.
 
 0.919
SMC26636.1
PTS system, mannose-specific IIA component.
 
    0.845
SMC26635.1
UPF0042 nucleotide-binding protein; Displays ATPase and GTPase activities.
 
    0.788
SMC26638.1
Pyruvate phosphate dikinase.
  
    0.780
SMC27792.1
Transcriptional regulator, XRE family with cupin sensor.
 
 
 0.745
SMC18654.1
Transcriptional regulator, XRE family with cupin sensor.
  
 
 0.713
SMC24947.1
Transcriptional regulator, XRE family with cupin sensor.
  
 
 0.713
speH
S-adenosylmethionine decarboxylase; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine; Belongs to the prokaryotic AdoMetDC family. Type 1 subfamily.
    
  0.701
speE-2
Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine.
    
  0.701
SMC26639.1
Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
       0.622
Your Current Organism:
Desulfacinum hydrothermale
NCBI taxonomy Id: 1121390
Other names: D. hydrothermale DSM 13146, Desulfacinum hydrothermale DSM 13146
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