STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rnfDElectron transport complex protein RnfD; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family. (325 aa)    
Predicted Functional Partners:
rnfE
Electron transport complex protein RnfE; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.
 
 
 0.998
rnfG
Electron transport complex protein RnfG; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the RnfG family.
 
 0.997
rnfA-2
Electron transport complex protein RnfA; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.
 
 
 0.996
SMC27362.1
Electron transport complex protein RnfC.
 
 0.992
SMC25869.1
Na+-transporting NADH:ubiquinone oxidoreductase subunit C.
 
 
 0.972
SMC22051.1
Na+-translocating ferredoxin:NAD+ oxidoreductase RNF, RnfC subunit.
 
 0.947
rnfB
Electron transport complex, RnfABCDGE type, B subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
  
 
 0.944
SMC17771.1
Putative Fe-S cluster.
  
 
 0.865
SMC18874.1
4Fe-4S dicluster domain-containing protein.
  
 
 0.827
SMC20680.1
4Fe-4S dicluster domain-containing protein.
  
 
 0.827
Your Current Organism:
Desulfacinum hydrothermale
NCBI taxonomy Id: 1121390
Other names: D. hydrothermale DSM 13146, Desulfacinum hydrothermale DSM 13146
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