STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMC27730.1Phospholipid-binding lipoprotein MlaA. (256 aa)    
Predicted Functional Partners:
SMC17005.1
Phospholipid transport system substrate-binding protein.
 
 
 
 0.915
SMC17601.1
phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein.
 
   
 0.825
SMC27726.1
cation:H+ antiporter.
       0.701
SMC17597.1
phospholipid/cholesterol/gamma-HCH transport system permease protein.
 
   
 0.648
SMC27718.1
Putative transmembrane protein (PGPGW).
       0.634
SMC27732.1
Protein of unknown function.
       0.499
lptD
LPS-assembly protein; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family.
 
   
 0.496
SMC27734.1
Nif-specific regulatory protein.
       0.435
nadE-2
NH(3)-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
       0.420
SMC27741.1
Nitrogen regulatory protein P-II family; Belongs to the P(II) protein family.
       0.420
Your Current Organism:
Desulfacinum hydrothermale
NCBI taxonomy Id: 1121390
Other names: D. hydrothermale DSM 13146, Desulfacinum hydrothermale DSM 13146
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