STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMC28309.1HDIG domain-containing protein. (276 aa)    
Predicted Functional Partners:
SMC27027.1
HDOD domain-containing protein.
  
     0.774
SMC17318.1
Diguanylate cyclase (GGDEF) domain-containing protein.
  
 
  0.646
SMC21506.1
Signal transduction histidine kinase.
   
 0.625
SMC25791.1
PAS domain S-box-containing protein.
   
 0.615
flgI
Flagellar P-ring protein precursor FlgI; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
 
     0.537
SMC28305.1
ParB-like nuclease domain-containing protein.
       0.532
SMC28307.1
Hypothetical protein.
       0.532
SMC24255.1
Response regulator c-di-GMP phosphodiesterase, RpfG family, contains REC and HD-GYP domains.
 
  
  0.509
flgH
Flagellar L-ring protein precursor FlgH; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
 
     0.499
SMC25619.1
PAS domain S-box-containing protein.
    
  0.488
Your Current Organism:
Desulfacinum hydrothermale
NCBI taxonomy Id: 1121390
Other names: D. hydrothermale DSM 13146, Desulfacinum hydrothermale DSM 13146
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.