STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG16762.1Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape. (287 aa)    
Predicted Functional Partners:
SHG16836.1
Peptidoglycan glycosyltransferase.
 
 
 0.992
SHG16723.1
Rod shape-determining protein MreB.
 
 
 0.991
SHF97060.1
Rod shape-determining protein MreB.
 
 
 0.970
mrdB
Cell elongation-specific peptidoglycan biosynthesis regulator RodA; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily.
 
  
 0.959
minC
Septum site-determining protein MinC; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization; Belongs to the MinC family.
  
  
 0.917
SHF42288.1
DNA repair protein RadC; Belongs to the UPF0758 family.
  
  
 0.887
SHE89301.1
Glucosyl-3-phosphoglycerate synthase.
  
 
 0.881
SHG27209.1
Hypothetical protein.
  
 
 0.881
SHG11314.1
Peptidoglycan synthetase FtsI.
 
 
 0.875
SHF27427.1
Septum site-determining protein MinD.
  
    0.865
Your Current Organism:
Desulfacinum infernum
NCBI taxonomy Id: 1121391
Other names: D. infernum DSM 9756, Desulfacinum infernum DSM 9756
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.