STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG20450.1Glycosyltransferase, GT2 family. (314 aa)    
Predicted Functional Partners:
SHG20907.1
Glycosyltransferase, GT2 family.
  
     0.717
SHG03581.1
Methyltransferase domain-containing protein.
 
 
 0.714
SHG20481.1
Glycosyltransferase, GT2 family.
 
 
 
0.709
SHG03128.1
Sugar transferase, PEP-CTERM system associated/exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
 
  
 0.703
SHG20413.1
Glycosyl transferase family 2.
 
 
 0.616
SHF91178.1
Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid).
  
 
 0.549
SHF57935.1
Tfp pilus assembly protein PilF.
  
 
 0.524
SHG20608.1
Glycosyltransferase, GT2 family.
 
 
 0.521
SHG03172.1
Polysaccharide export outer membrane protein.
 
  
 0.516
SHF84331.1
dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
 
 0.500
Your Current Organism:
Desulfacinum infernum
NCBI taxonomy Id: 1121391
Other names: D. infernum DSM 9756, Desulfacinum infernum DSM 9756
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.