STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHI82164.1Chromosome partitioning protein. (269 aa)    
Predicted Functional Partners:
SHL48175.1
Chromosome partitioning protein, ParB family; Belongs to the ParB family.
 
 
 0.924
SHI82123.1
Hypothetical protein.
       0.773
SHL35456.1
CobQ/CobB/MinD/ParA nucleotide binding domain-containing protein.
  
     0.727
SHJ92888.1
ParB-like nuclease domain-containing protein.
  
 
 0.681
SHL39792.1
DNA modification methylase; Belongs to the N(4)/N(6)-methyltransferase family.
  
 
 0.681
SHL49906.1
DNA methylase; Belongs to the N(4)/N(6)-methyltransferase family.
  
 
 0.681
SHJ26231.1
ParB-like nuclease domain-containing protein.
  
 
 0.661
SHJ08015.1
Iron complex outermembrane recepter protein.
    
 
 0.657
SHJ51266.1
Iron complex outermembrane recepter protein.
    
 
 0.657
SHJ51383.1
Iron complex outermembrane recepter protein.
    
 
 0.657
Your Current Organism:
Desulfatibacillum alkenivorans DSM 16219
NCBI taxonomy Id: 1121393
Other names: D. alkenivorans DSM 16219
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.