STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHK52819.1Hydrogenase maturation protease. (153 aa)    
Predicted Functional Partners:
SHL10266.1
[NiFe] hydrogenase large subunit; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.
 
 
 0.940
SHL10047.1
Hydrogenase large subunit.
 
 
 0.939
SHL10307.1
[NiFe] hydrogenase small subunit.
 
 
 0.917
SHL10089.1
Hydrogenase small subunit.
 
 
 0.915
SHK52906.1
F420-non-reducing hydrogenase subunit G.
 
 
 0.872
SHK52856.1
F420-non-reducing hydrogenase subunit A; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.
 
  
 0.865
SHK38047.1
NADH dehydrogenase.
    
 
 0.798
SHK52945.1
Heterodisulfide reductase subunit A.
  
 
 0.767
SHI48827.1
Nitrate reductase gamma subunit.
    
 0.716
SHL16024.1
F420-non-reducing hydrogenase small subunit.
 
 
 0.701
Your Current Organism:
Desulfatibacillum alkenivorans DSM 16219
NCBI taxonomy Id: 1121393
Other names: D. alkenivorans DSM 16219
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.