STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHK95581.1Hypothetical protein. (309 aa)    
Predicted Functional Partners:
SHJ21610.1
Hook-length control protein FliK.
  
    0.779
SHL09717.1
PKD repeat-containing protein.
  
   
 0.778
SHK50647.1
HEAT repeat-containing protein.
  
     0.773
SHJ00233.1
Hypothetical protein.
  
     0.771
SHL15839.1
Hypothetical protein.
  
     0.770
SHJ57801.1
Uncharacterized conserved protein.
  
     0.766
SHJ21162.1
Disaggregatase related.
  
     0.765
SHL32617.1
Right handed beta helix region.
  
     0.765
SHK60203.1
Adhesin/invasin.
  
     0.764
SHK80649.1
Tetratricopeptide repeat-containing protein.
  
     0.764
Your Current Organism:
Desulfatibacillum alkenivorans DSM 16219
NCBI taxonomy Id: 1121393
Other names: D. alkenivorans DSM 16219
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.