STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHL25077.1Transcriptional regulator, TetR family. (223 aa)    
Predicted Functional Partners:
SHJ84920.1
Transcriptional regulator, TetR family.
  
     0.663
SHK70890.1
Transcriptional regulator, TetR family.
  
     0.638
SHJ42033.1
Transcriptional regulator, TetR family.
  
     0.629
SHL26757.1
Transcriptional regulator, TetR family.
  
     0.625
SHI86449.1
Transcriptional regulator, TetR family.
  
     0.603
SHK01154.1
Transcriptional regulator, TetR family.
  
     0.587
SHK49412.1
Transcriptional regulator, TetR family.
  
     0.555
SHK44449.1
Transcriptional regulator, TetR family.
  
     0.554
SHK00921.1
Transcriptional regulator, TetR family.
  
     0.545
SHK21959.1
Transcriptional regulator, TetR family.
  
     0.522
Your Current Organism:
Desulfatibacillum alkenivorans DSM 16219
NCBI taxonomy Id: 1121393
Other names: D. alkenivorans DSM 16219
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.