STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000429925_00765Unannotated protein. (176 aa)    
Predicted Functional Partners:
GCA_000429925_00764
Unannotated protein.
       0.781
GCA_000429925_00766
Unannotated protein.
       0.781
GCA_000429925_00763
Unannotated protein.
       0.746
GCA_000429925_00761
Unannotated protein.
       0.734
GCA_000429925_00762
Unannotated protein.
       0.726
GCA_000429925_00760
Unannotated protein.
       0.585
GCA_000429925_00759
Unannotated protein.
       0.550
GCA_000429925_00758
Unannotated protein.
       0.543
GCA_000429925_00767
Unannotated protein.
       0.471
GCA_000429925_00768
Unannotated protein.
       0.471
Your Current Organism:
Desulfatirhabdium butyrativorans
NCBI taxonomy Id: 1121394
Other names: D. butyrativorans DSM 18734, Desulfatirhabdium butyrativorans DSM 18734
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.