STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000429925_01456Unannotated protein. (393 aa)    
Predicted Functional Partners:
GCA_000429925_00440
Unannotated protein.
     0.895
GCA_000429925_01457
Unannotated protein.
 
     0.846
GCA_000429925_00915
Unannotated protein.
 
     0.817
GCA_000429925_00986
Unannotated protein.
 
     0.810
GCA_000429925_02340
Unannotated protein.
 
     0.782
GCA_000429925_02988
Unannotated protein.
 
     0.782
GCA_000429925_02987
Unannotated protein.
 
     0.780
GCA_000429925_01458
Unannotated protein.
       0.773
GCA_000429925_01459
Unannotated protein.
       0.773
GCA_000429925_01262
Unannotated protein.
 
    0.713
Your Current Organism:
Desulfatirhabdium butyrativorans
NCBI taxonomy Id: 1121394
Other names: D. butyrativorans DSM 18734, Desulfatirhabdium butyrativorans DSM 18734
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.