STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000429925_01934Unannotated protein. (867 aa)    
Predicted Functional Partners:
GCA_000429925_01933
Unannotated protein.
     0.994
GCA_000429925_01932
Unannotated protein.
 
   
 0.955
GCA_000429925_02163
Unannotated protein.
 
     0.793
GCA_000429925_01876
Unannotated protein.
 
   
 0.671
GCA_000429925_02109
Unannotated protein.
 
   
 0.620
GCA_000429925_01935
Unannotated protein.
       0.601
GCA_000429925_02117
Unannotated protein.
  
     0.567
GCA_000429925_02112
Unannotated protein.
  
     0.549
GCA_000429925_03106
Unannotated protein.
 
   
 0.532
GCA_000429925_01877
Unannotated protein.
  
     0.495
Your Current Organism:
Desulfatirhabdium butyrativorans
NCBI taxonomy Id: 1121394
Other names: D. butyrativorans DSM 18734, Desulfatirhabdium butyrativorans DSM 18734
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.