STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000429925_02783Unannotated protein. (98 aa)    
Predicted Functional Partners:
GCA_000429925_02784
Unannotated protein.
       0.814
GCA_000429925_02780
Unannotated protein.
       0.773
GCA_000429925_02781
Unannotated protein.
       0.773
GCA_000429925_02782
Unannotated protein.
       0.773
GCA_000429925_02779
Unannotated protein.
       0.651
GCA_000429925_03269
Unannotated protein.
  
     0.542
GCA_000429925_03417
Unannotated protein.
  
     0.495
GCA_000429925_02058
Unannotated protein.
  
     0.491
GCA_000429925_02264
Unannotated protein.
  
     0.465
GCA_000429925_02420
Unannotated protein.
  
     0.452
Your Current Organism:
Desulfatirhabdium butyrativorans
NCBI taxonomy Id: 1121394
Other names: D. butyrativorans DSM 18734, Desulfatirhabdium butyrativorans DSM 18734
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.