STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000429925_03602Unannotated protein. (593 aa)    
Predicted Functional Partners:
GCA_000429925_03601
Unannotated protein.
 0.996
GCA_000429925_03064
Unannotated protein.
 
0.987
GCA_000429925_00786
Unannotated protein.
 
0.986
GCA_000429925_03316
Unannotated protein.
 
 0.986
GCA_000429925_02492
Unannotated protein.
 0.963
GCA_000429925_00164
Unannotated protein.
 
 
0.929
GCA_000429925_02376
Unannotated protein.
 
 0.929
GCA_000429925_01504
Unannotated protein.
 
0.924
GCA_000429925_01256
Unannotated protein.
 0.918
GCA_000429925_00722
Unannotated protein.
  
0.916
Your Current Organism:
Desulfatirhabdium butyrativorans
NCBI taxonomy Id: 1121394
Other names: D. butyrativorans DSM 18734, Desulfatirhabdium butyrativorans DSM 18734
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.