STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHN59832.1Two component transcriptional regulator, winged helix family. (232 aa)    
Predicted Functional Partners:
SHN59825.1
Histidine kinase.
 0.983
SHN74875.1
HAMP domain-containing protein.
 0.906
SHN59753.1
Histidine kinase.
 0.836
SHN59350.1
Histidine kinase.
 0.821
SHN49731.1
Signal transduction histidine kinase.
  
  0.808
SHN88152.1
Histidine kinase.
 0.806
SHN69771.1
Signal transduction histidine kinase.
 0.800
SHN78821.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
 0.798
SHN56517.1
Signal transduction histidine kinase.
  
  0.775
SHN79789.1
PAS/PAC sensor hybrid histidine kinase.
 
0.772
Your Current Organism:
Desulfitobacterium chlororespirans
NCBI taxonomy Id: 1121395
Other names: D. chlororespirans DSM 11544, Desulfitobacterium chlororespirans DSM 11544
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.