STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000519125_00182Unannotated protein. (271 aa)    
Predicted Functional Partners:
GCA_000519125_02506
Unannotated protein.
   0.891
GCA_000519125_02177
Unannotated protein.
 
      0.818
GCA_000519125_01069
Unannotated protein.
 
  
 0.744
GCA_000519125_00430
Unannotated protein.
    
 0.718
GCA_000519125_02155
Unannotated protein.
    
 
 0.686
GCA_000519125_00790
Unannotated protein.
  
    0.586
GCA_000519125_01818
Unannotated protein.
 
 
   0.577
GCA_000519125_01343
Unannotated protein.
     
 0.512
GCA_000519125_00183
Unannotated protein.
       0.508
GCA_000519125_00109
Unannotated protein.
    
 0.496
Your Current Organism:
Desulfocurvus vexinensis
NCBI taxonomy Id: 1121406
Other names: D. vexinensis DSM 17965, Desulfocurvus vexinensis DSM 17965, Desulfovibrio sp. AS36, Desulfovibrio sp. VNs36, delta proteobacterium VNs36
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.