STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000519125_00935Unannotated protein. (189 aa)    
Predicted Functional Partners:
GCA_000519125_00936
Unannotated protein.
 
 0.986
GCA_000519125_00938
Unannotated protein.
 
  
 0.940
GCA_000519125_00934
Unannotated protein.
 
     0.877
GCA_000519125_00937
Unannotated protein.
 
  
 0.869
GCA_000519125_00115
Unannotated protein.
  
 0.820
GCA_000519125_00263
Unannotated protein.
  
 0.820
GCA_000519125_01281
Unannotated protein.
  
 0.820
GCA_000519125_01182
Unannotated protein.
  
 
 0.743
GCA_000519125_01401
Unannotated protein.
  
 0.535
GCA_000519125_01404
Unannotated protein.
  
 0.535
Your Current Organism:
Desulfocurvus vexinensis
NCBI taxonomy Id: 1121406
Other names: D. vexinensis DSM 17965, Desulfocurvus vexinensis DSM 17965, Desulfovibrio sp. AS36, Desulfovibrio sp. VNs36, delta proteobacterium VNs36
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.