STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHH46193.1Citrate lyase subunit beta / citryl-CoA lyase; Belongs to the HpcH/HpaI aldolase family. (299 aa)    
Predicted Functional Partners:
SHH46269.1
succinyl-CoA synthetase beta subunit.
 
  
 0.927
SHH46061.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
 
  
 0.909
SHI00726.1
Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
    
 0.893
SHH47043.1
Allosteric NADP-dependent malic enzyme.
 
 
 0.890
sucD
succinyl-CoA synthetase alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.
 
 
 0.881
SHH74064.1
Pyruvate carboxylase subunit B.
  
 
 0.856
SHH88347.1
Pyruvate carboxylase subunit B.
  
 
 0.856
SHH75550.1
Ribulose-5-phosphate 4-epimerase/Fuculose-1-phosphate aldolase.
   
    0.844
SHI08920.1
Ribulose-5-phosphate 4-epimerase/Fuculose-1-phosphate aldolase.
   
    0.844
SHH35898.1
acetyl-CoA carboxylase carboxyl transferase subunit beta.
    
 0.840
Your Current Organism:
Desulfofustis glycolicus
NCBI taxonomy Id: 1121409
Other names: D. glycolicus DSM 9705, Desulfofustis glycolicus DSM 9705
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