STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHH51728.1CO dehydrogenase maturation factor. (252 aa)    
Predicted Functional Partners:
SHH54008.1
acetyl-CoA decarbonylase/synthase beta subunit.
 
  
 0.964
SHH54047.1
acetyl-CoA decarbonylase/synthase delta subunit.
 
  
 0.883
SHH53977.1
CO-methylating acetyl-CoA synthase corrinoid iron-sulfur protein large subunit precursor.
 
  
 0.836
SHH53727.1
Putative Fe-S cluster.
 
  
 0.821
SHH54029.1
Ni-dependent carbon monoxide dehydrogenase precursor.
 
   
 0.819
SHH52966.1
Carbon-monoxide dehydrogenase catalytic subunit.
 
   
 0.816
SHI11936.1
Putative Fe-S cluster.
 
  
 0.786
SHH51688.1
Nitrate reductase gamma subunit.
       0.773
SHH51711.1
Heterodisulfide reductase subunit B.
       0.773
SHH54068.1
Uncharacterized 2Fe-2 and 4Fe-4S clusters-containing protein, contains DUF4445 domain.
 
     0.771
Your Current Organism:
Desulfofustis glycolicus
NCBI taxonomy Id: 1121409
Other names: D. glycolicus DSM 9705, Desulfofustis glycolicus DSM 9705
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