STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHI00726.1Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. (504 aa)    
Predicted Functional Partners:
mdh
Malate dehydrogenase (NAD); Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family.
  
 
 0.997
SHH59982.1
Succinate dehydrogenase subunit B.
  
 
 0.985
SHH47043.1
Allosteric NADP-dependent malic enzyme.
 
 0.984
SHH58623.1
Isocitrate dehydrogenase (NADP); Belongs to the isocitrate and isopropylmalate dehydrogenases family.
  
  
 0.982
SHH92202.1
Succinate dehydrogenase, hydrophobic membrane anchor protein/succinate dehydrogenase, cytochrome b556 subunit,TIGR02970.
  
 
 0.982
SHH74064.1
Pyruvate carboxylase subunit B.
    
 0.979
SHH88347.1
Pyruvate carboxylase subunit B.
    
 0.979
SHH92232.1
Succinate dehydrogenase / fumarate reductase iron-sulfur subunit.
  
 
 0.971
SHH59960.1
Succinate dehydrogenase subunit A.
  
 
 0.967
SHI00528.1
Fumarase, class II.
  
 
 0.965
Your Current Organism:
Desulfofustis glycolicus
NCBI taxonomy Id: 1121409
Other names: D. glycolicus DSM 9705, Desulfofustis glycolicus DSM 9705
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